Workshop: Creating data pipelines with KNIME

KNIME is a free open-source tool that allows you to create automated data workflows. The workshop on 12.1.2023 gives an introduction to KNIME and shows you, with practical examples, how you can use KNIME.

In this course we will teach you how to build reproducible and self-documenting data pipelines to manipulate and visualize data using KNIME Analytics Platform (AP). KNIME AP is an open-source visual programming tool that's free of charge and available for everyone. We will work on an example of malaria HTS data, and cover how to import data from different sources and formats (including chemical data), go through the most common and useful data manipulation operations, and visualize the data in an interactive way.

Besides that, we will show you how to programmatically retrieve data from web services, and if time allows how to integrate Python or R code into your pipeline. Please note that active participation works best with a laptop. Please come with KNIME AP preinstalled from https://www.knime.com/downloads, so we can start right away. 

Download Poster (PDF)

Agenda:

09:00 – 10:15             Introduction to the free open source KNIME tool
10:15 – 10:30             Coffee break
10:30 – 12:00             Hands on session to build a data pipeline 

                                                     - Import and manipulate HTS assay and chemical data

                                                     - Build interactive dashboards for data visualization and exploration

                                                     - Retrieve data programmatically from web services

Date and Location:    12.1.2023, ETH Zürich, Campus Hönggerberg, HCI G3

Registration:              https://t1p.de/cuusw